If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 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=> 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 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=> 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ), 'gf_id' => 'HOM05D000489', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000489' ), 'data_identifier' => 'HOM05D000489', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000489', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1089', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p22740' => 'bna', 'A01p26890' => 'bna', 'A01p32550' => 'bna', 'A02p25420' => 'bna', 'A02p26850' => 'bna', 'A02p43150' => 'bna', 'A03p28200' => 'bna', 'A03p42830' => 'bna', 'A03p45080' => 'bna', 'A04p05580' => 'bna', 'A04p35220' => 'bna', 'A05p26070' => 'bna', 'A06p30800' => 'bna', 'A07p18000' => 'bna', 'A09p30080' => 'bna', 'A09p69400' => 'bna', 'Aa31LG1G17840' => 'aar', 'Aa31LG1G8580' => 'aar', 'Aa31LG1G9420' => 'aar', 'Aa31LG3G17670' => 'aar', 'Aa31LG4G13430' => 'aar', 'Aa31LG5G8510' => 'aar', 'Aa31LG6G8970' => 'aar', 'Aa31LG8G12380' => 'aar', 'Aa31LG8G9130' => 'aar', 'Aa31LG9G14530' => 'aar', 'Aa31LG9G2560' => 'aar', 'Actinidia00258' => 'ach', 'Actinidia00782' => 'ach', 'Actinidia07015' => 'ach', 'Actinidia08483' => 'ach', 'Actinidia10300' => 'ach', 'Actinidia21128' => 'ach', 'Actinidia22472' => 'ach', 'Actinidia23526' => 'ach', 'Actinidia23527' => 'ach', 'Actinidia24910' => 'ach', 'Actinidia28063' => 'ach', 'Actinidia36950' => 'ach', 'Actinidia37190' => 'ach', 'Actinidia40135' => 'ach', 'Ah.07g204250' => 'amhyb', 'Ah.09g232010' => 'amhyb', 'Ah.11g050440' => 'amhyb', 'Ah.11g050450' => 'amhyb', 'Ah.14g085460' => 'amhyb', 'AL1G12570' => 'aly', 'AL1G50850' => 'aly', 'AL1G67220' => 'aly', 'AL3G36900' => 'aly', 'AL3G45660' => 'aly', 'AL4G20840' => 'aly', 'AL4G47760' => 'aly', 'AL5G21690' => 'aly', 'AL5G33140' => 'aly', 'AL6G19760' => 'aly', 'AL6G42440' => 'aly', 'AL7G41050' => 'aly', 'AL8G41350' => 'aly', 'Aqoxy2G00021' => 'aox', 'Aqoxy2G03422' => 'aox', 'Aqoxy5G00441' => 'aox', 'Aqoxy5G00442' => 'aox', 'Aqoxy5G01968' => 'aox', 'Aqoxy6G00572' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2B1HMX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49Z37F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FJE7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7W2D79' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94LY4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3FCUF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DG98DY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E295CW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FH5Z1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GY1NN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY1MX1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF2RWL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF0WST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QQS0V2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCR2SD' => 'arhy', 'AT1G03103' => 'ath', 'AT1G36150' => 'ath', 'AT2G13820' => 'ath', 'AT2G27130' => 'ath', 'AT2G48130' => 'ath', 'AT3G22570' => 'ath', 'AT3G22580' => 'ath', 'AT3G22600' => 'ath', 'AT3G43720' => 'ath', 'AT4G08670' => 'ath', 'AT4G14815' => 'ath', 'AT5G09370' => 'ath', 'AT5G64080' => 'ath', 'ATR0068G075' => 'atr', 'ATR0564G030' => 'atr', 'ATR0665G662' => 'atr', 'Atru.chr13.1262' => 'acertr', 'Atru.chr3.2922' => 'acertr', 'Atru.chr4.2435' => 'acertr', 'Atru.chr4.2436' => 'acertr', 'Atru.chr5.1477' => 'acertr', 'Atru.chr5.1479' => 'acertr', 'Atru.chr5.1480' => 'acertr', 'Atru.chr6.1127' => 'acertr', 'Atru.ctg752_3.51' => 'acertr', 'AUR62001607' => 'cqu', 'AUR62026966' => 'cqu', 'AUR62027376' => 'cqu', 'AUR62028596' => 'cqu', 'AUR62031292' => 'cqu', 'AUR62032324' => 'cqu', 'AUR62033667' => 'cqu', 'AUR62034720' => 'cqu', 'AUR62041369' => 'cqu', 'AUR62043701' => 'cqu', 'BcaB01g02852' => 'bca', 'BcaB02g09788' => 'bca', 'BcaB02g10073' => 'bca', 'BcaB04g17830' => 'bca', 'BcaB04g18263' => 'bca', 'BcaB04g19207' => 'bca', 'BcaB04g20510' => 'bca', 'BcaB05g21558' => 'bca', 'BcaB05g23455' => 'bca', 'BcaB05g23936' => 'bca', 'BcaB06g26372' => 'bca', 'BcaB07g29719' => 'bca', 'BcaB07g33076' => 'bca', 'BcaB08g34546' => 'bca', 'BcaB08g37212' => 'bca', 'BcaC01g03113' => 'bca', 'BcaC01g03435' => 'bca', 'BcaC01g04759' => 'bca', 'BcaC02g09088' => 'bca', 'BcaC02g10858' => 'bca', 'BcaC03g13249' => 'bca', 'BcaC03g16451' => 'bca', 'BcaC03g18242' => 'bca', 'BcaC04g20918' => 'bca', 'BcaC05g28032' => 'bca', 'BcaC07g37501' => 'bca', 'BcaC07g37856' => 'bca', 'BcaC08g43753' => 'bca', 'BcaC09g49182' => 'bca', 'BcaC09g49183' => 'bca', 'BcaC09g49631' => 'bca', 'BcaC09g50162' => 'bca', 'BcaNung00331' => 'bca', 'BolC1t02759H' => 'bol', 'BolC1t03400H' => 'bol', 'BolC1t04125H' => 'bol', 'BolC1t04126H' => 'bol', 'BolC2t06342H' => 'bol', 'BolC2t10072H' => 'bol', 'BolC2t12385H' => 'bol', 'BolC3t15719H' => 'bol', 'BolC3t17530H' => 'bol', 'BolC3t17878H' => 'bol', 'BolC3t18482H' => 'bol', 'BolC4t23936H' => 'bol', 'BolC4t25406H' => 'bol', 'BolC5t32789H' => 'bol', 'BolC6t36263H' => 'bol', 'BolC8t47823H' => 'bol', 'BolC8t48246H' => 'bol', 'BolC8t52932H' => 'bol', 'BolC9t56629H' => 'bol', 'BolSC33t60635H' => 'bol', 'BraA01t02186Z' => 'bra', 'BraA01t02822Z' => 'bra', 'BraA01t03385Z' => 'bra', 'BraA02t04976Z' => 'bra', 'BraA02t07530Z' => 'bra', 'BraA02t07695Z' => 'bra', 'BraA02t09235Z' => 'bra', 'BraA03t12028Z' => 'bra', 'BraA03t13430Z' => 'bra', 'BraA03t13643Z' => 'bra', 'BraA04t16257Z' => 'bra', 'BraA04t18955Z' => 'bra', 'BraA06t26021Z' => 'bra', 'BraA07t29519Z' => 'bra', 'BraA08t32821Z' => 'bra', 'BraA08t33143Z' => 'bra', 'BraA09t38575Z' => 'bra', 'BraA09t38677Z' => 'bra', 'C01p28300' => 'bna', 'C01p34300' => 'bna', 'C01p41710' => 'bna', 'C02p03810' => 'bna', 'C02p40410' => 'bna', 'C02p42690' => 'bna', 'C02p63130' => 'bna', 'C03p34090' => 'bna', 'C03p52620' => 'bna', 'C03p55940' => 'bna', 'C03p62190' => 'bna', 'C04p24390' => 'bna', 'C04p38310' => 'bna', 'C05p40470' => 'bna', 'C06p11290' => 'bna', 'C08p54230' => 'bna', 'C09p37940' => 'bna', 'C09p68000' => 'bna', 'CAN.G1094.20' => 'can', 'CAN.G1094.21' => 'can', 'CAN.G11.37' => 'can', 'CAN.G1250.1' => 'can', 'CAN.G1549.12' => 'can', 'CAN.G1549.23' => 'can', 'CAN.G1549.24' => 'can', 'CAN.G231.11' => 'can', 'CAN.G231.12' => 'can', 'CAN.G280.14' => 'can', 'CAN.G367.3' => 'can', 'CAN.G523.89' => 'can', 'CAN.G65.212' => 'can', 'CAN.G712.11' => 'can', 'CANSAT11G2140' => 'cansat', 'CANSAT25G3026' => 'cansat', 'CANSAT54G2433' => 'cansat', 'CANSAT78G0500' => 'cansat', 'CANSAT78G1938' => 'cansat', 'CARHR034910' => 'chi', 'CARHR098450' => 'chi', 'CARHR104680' => 'chi', 'CARHR114550' => 'chi', 'CARHR119480' => 'chi', 'CARHR143520' => 'chi', 'CARHR204040' => 'chi', 'CARHR221370' => 'chi', 'CARHR259010' => 'chi', 'CARHR259650' => 'chi', 'CARHR277990' => 'chi', 'Carub.0001s3358' => 'cru', 'Carub.0003s2272' => 'cru', 'Carub.0003s2275' => 'cru', 'Carub.0003s2823' => 'cru', 'Carub.0004s0764' => 'cru', 'Carub.0004s3087' => 'cru', 'Carub.0005s0942' => 'cru', 'Carub.0005s0954' => 'cru', 'Carub.0006s0791' => 'cru', 'Carub.0006s0792' => 'cru', 'Carub.0006s2718' => 'cru', 'Carub.0007s2731' => 'cru', 'Carub.0008s2486' => 'cru', 'Ca_00125_v3' => 'car', 'Ca_08616_v3' => 'car', 'Ca_08624_v3' => 'car', 'Ca_09742_v3' => 'car', 'Ca_10869_v3' => 'car', 'Ca_16231_v3' => 'car', 'Ca_18339_v3' => 'car', 'Ca_24423_v3' => 'car', 'Cc01_g07620' => 'ccan', 'Cc01_g19240' => 'ccan', 'Cc01_g19250' => 'ccan', 'Cc02_g21750' => 'ccan', 'Cc03_g04020' => 'ccan', 'CDE02G2277' => 'cde', 'CDE04G2494' => 'cde', 'CDE05G2271' => 'cde', 'CDE09G1342' => 'cde', 'CDE09G1414' => 'cde', 'CDE10G1095' => 'cde', 'Cfa005629' => 'cfa', 'Cfa006168' => 'cfa', 'Cfa010252' => 'cfa', 'Cfa015923' => 'cfa', 'Ciclev10006599m.g' => 'ccl', 'Ciclev10006862m.g' => 'ccl', 'Ciclev10016831m.g' => 'ccl', 'Ciclev10021499m.g' => 'ccl', 'Ciclev10022412m.g' => 'ccl', 'Ciclev10029367m.g' => 'ccl', 'CiPaw.01G168500' => 'cil', 'CiPaw.01G168600' => 'cil', 'CiPaw.02G099000' => 'cil', 'CiPaw.02G099100' => 'cil', 'CiPaw.05G038100' => 'cil', 'CiPaw.06G152200' => 'cil', 'CiPaw.07G089500' => 'cil', 'CiPaw.13G128200' => 'cil', 'ClCG03G009020' => 'cla', 'ClCG03G014210' => 'cla', 'ClCG05G005060' => 'cla', 'ClCG06G006310' => 'cla', 'ClCG07G000370' => 'cla', 'ClCG09G015260' => 'cla', 'COL.COLO4_09062' => 'col', 'COL.COLO4_09063' => 'col', 'COL.COLO4_11867' => 'col', 'COL.COLO4_11868' => 'col', 'COL.COLO4_16459' => 'col', 'COL.COLO4_21512' => 'col', 'COL.COLO4_21513' => 'col', 'COL.COLO4_25284' => 'col', 'COL.COLO4_33856' => 'col', 'COL.COLO4_33864' => 'col', 'Cpa.g.sc100.24' => 'cpa', 'Cpa.g.sc103.73' => 'cpa', 'Cpa.g.sc52.55' => 'cpa', 'Cpa.g.sc58.82' => 'cpa', 'Cpa.g.sc66.89' => 'cpa', 'CsaV3_1G042030' => 'csa', 'CsaV3_3G013120' => 'csa', 'CsaV3_3G020010' => 'csa', 'CsaV3_5G023600' => 'csa', 'CsaV3_6G037170' => 'csa', 'CsaV3_7G006350' => 'csa', 'CSS0002793' => 'camsi', 'CSS0008034' => 'camsi', 'CSS0009034' => 'camsi', 'CSS0013408' => 'camsi', 'CSS0017321' => 'camsi', 'CSS0017500' => 'camsi', 'CSS0021003' => 'camsi', 'CSS0026482' => 'camsi', 'CSS0028459' => 'camsi', 'CSS0029345' => 'camsi', 'CSS0029578' => 'camsi', 'CSS0041056' => 'camsi', 'DCAR_002376' => 'dca', 'DCAR_002719' => 'dca', 'DCAR_008708' => 'dca', 'DCAR_018433' => 'dca', 'DCAR_018434' => 'dca', 'DCAR_021847' => 'dca', 'DCAR_023859' => 'dca', 'DCAR_024172' => 'dca', 'DCAR_030662' => 'dca', 'DCAR_030663' => 'dca', 'Dinv05238' => 'din', 'Dinv09047' => 'din', 'Dinv14010' => 'din', 'Dinv14012' => 'din', 'Dinv18664' => 'din', 'Dinv24208' => 'din', 'Dinv31207' => 'din', 'Dinv32088' => 'din', 'Dinv32909' => 'din', 'Dinv32910' => 'din', 'Dinv44553' => 'din', 'Dinv44554' => 'din', 'Dinv44746' => 'din', 'Duzib052G0439' => 'dzi', 'Duzib052G0712' => 'dzi', 'Duzib052G1027' => 'dzi', 'Duzib132G0082' => 'dzi', 'Duzib133G0364' => 'dzi', 'Duzib133G0759' => 'dzi', 'Duzib133G1377' => 'dzi', 'Duzib138G0941' => 'dzi', 'Duzib138G1740' => 'dzi', 'Duzib151G0620' => 'dzi', 'Duzib168G2403' => 'dzi', 'Duzib170G0023' => 'dzi', 'Duzib212G0281' => 'dzi', 'Duzib248G1232' => 'dzi', 'ECA233G2982' => 'eca', 'ECA236G1545' => 'eca', 'ECA236G4375' => 'eca', 'ECA236G4717' => 'eca', 'ECA238G3624' => 'eca', 'ECA240G1441' => 'eca', 'ECA247G2167' => 'eca', 'ECA247G3313' => 'eca', 'ECA248G2703' => 'eca', 'ECA248G2909' => 'eca', 'ECA248G3850' => 'eca', 'EL10Ac3g06482' => 'bvu', 'EL10Ac5g10538' => 'bvu', 'EL10Ac5g10539' => 'bvu', 'EL10Ac7g16225' => 'bvu', 'EL10Ac8g19349' => 'bvu', 'Eucgr.B01056' => 'egr', 'Eucgr.B03788' => 'egr', 'Eucgr.H03439' => 'egr', 'Eucgr.H03441' => 'egr', 'Eucgr.H03442' => 'egr', 'Eucgr.I02679' => 'egr', 'Eucgr.J00621' => 'egr', 'Eucgr.K03346' => 'egr', 'Eucgr.K03347' => 'egr', 'Eucgr.K03348' => 'egr', 'FAN04G1430' => 'fan', 'FAN04G1703' => 'fan', 'FAN07G1345' => 'fan', 'FAN08G0017' => 'fan', 'FAN08G0936' => 'fan', 'FAN11G1773' => 'fan', 'FAN12G1589' => 'fan', 'FAN13G0970' => 'fan', 'FAN13G3066' => 'fan', 'FAN15G3173' => 'fan', 'FAN16G0488' => 'fan', 'FAN17G1366' => 'fan', 'FAN18G0428' => 'fan', 'FAN18G2824' => 'fan', 'FAN20G0305' => 'fan', 'FAN20G1637' => 'fan', 'FAN21G4015' => 'fan', 'FAN22G0316' => 'fan', 'FAN24G1682' => 'fan', 'FAN25G1718' => 'fan', 'FAN27G0343' => 'fan', 'FAN27G2841' => 'fan', 'FvH4_2g23211' => 'fve', 'FvH4_2g23220' => 'fve', 'FvH4_3g27100' => 'fve', 'FvH4_4g16110' => 'fve', 'FvH4_5g30920' => 'fve', 'FvH4_5g37990' => 'fve', 'Glyma.01G234900' => 'gma', 'Glyma.03G156100' => 'gma', 'Glyma.05G119100' => 'gma', 'Glyma.08G074100' => 'gma', 'Glyma.10G028100' => 'gma', 'Glyma.11G008000' => 'gma', 'Glyma.13G075700' => 'gma', 'Glyma.14G170200' => 'gma', 'Glyma.15G052200' => 'gma', 'Glyma.19G158400' => 'gma', 'Glyma.20G049800' => 'gma', 'Glyma.20G146800' => 'gma', 'Gohir.A02G033200' => 'ghi', 'Gohir.A02G033300' => 'ghi', 'Gohir.A03G172500' => 'ghi', 'Gohir.A04G112700' => 'ghi', 'Gohir.A05G229300' => 'ghi', 'Gohir.A05G333400' => 'ghi', 'Gohir.A06G038100' => 'ghi', 'Gohir.A07G115300' => 'ghi', 'Gohir.A09G217000' => 'ghi', 'Gohir.A09G217100' => 'ghi', 'Gohir.A11G124400' => 'ghi', 'Gohir.A11G124500' => 'ghi', 'Gohir.A12G004100' => 'ghi', 'Gohir.A12G004200' => 'ghi', 'Gohir.A12G014300' => 'ghi', 'Gohir.A13G066151' => 'ghi', 'Gohir.A13G221300' => 'ghi', 'Gohir.D02G039700' => 'ghi', 'Gohir.D02G039800' => 'ghi', 'Gohir.D02G195700' => 'ghi', 'Gohir.D04G153900' => 'ghi', 'Gohir.D05G231600' => 'ghi', 'Gohir.D06G039666' => 'ghi', 'Gohir.D07G119500' => 'ghi', 'Gohir.D08G204700' => 'ghi', 'Gohir.D09G219400' => 'ghi', 'Gohir.D09G219500' => 'ghi', 'Gohir.D11G129600' => 'ghi', 'Gohir.D11G129700' => 'ghi', 'Gohir.D12G003800' => 'ghi', 'Gohir.D12G003900' => 'ghi', 'Gohir.D12G014900' => 'ghi', 'Gohir.D13G055250' => 'ghi', 'Gohir.D13G225300' => 'ghi', 'Gorai.001G128800' => 'gra', 'Gorai.004G216700' => 'gra', 'Gorai.005G044000' => 'gra', 'Gorai.005G044100' => 'gra', 'Gorai.005G218700' => 'gra', 'Gorai.005G222300' => 'gra', 'Gorai.006G240400' => 'gra', 'Gorai.006G240500' => 'gra', 'Gorai.007G138600' => 'gra', 'Gorai.007G138700' => 'gra', 'Gorai.008G003600' => 'gra', 'Gorai.008G003700' => 'gra', 'Gorai.008G015000' => 'gra', 'Gorai.009G239800' => 'gra', 'Gorai.010G044100' => 'gra', 'Gorai.012G141100' => 'gra', 'Gorai.013G062500' => 'gra', 'Gorai.013G256100' => 'gra', 'GSVIVG01001177001' => 'vvi', 'GSVIVG01001178001' => 'vvi', 'GSVIVG01001180001' => 'vvi', 'GSVIVG01018008001' => 'vvi', 'GSVIVG01018009001' => 'vvi', 'GSVIVG01029796001' => 'vvi', 'HanXRQChr01g0022311' => 'han', 'HanXRQChr04g0119001' => 'han', 'HanXRQChr10g0278401' => 'han', 'HanXRQChr10g0282221' => 'han', 'HanXRQChr10g0300691' => 'han', 'HanXRQChr10g0310011' => 'han', 'HanXRQChr10g0310021' => 'han', 'HanXRQChr10g0310031' => 'han', 'HanXRQChr10g0310041' => 'han', 'HanXRQChr11g0323881' => 'han', 'HanXRQChr11g0336911' => 'han', 'HanXRQChr14g0435961' => 'han', 'HanXRQChr15g0493031' => 'han', 'HanXRQChr15g0493041' => 'han', 'Haze_00848' => 'cav', 'Haze_00869' => 'cav', 'Haze_04682' => 'cav', 'Haze_10639' => 'cav', 'Haze_23646' => 'cav', 'Haze_23647' => 'cav', 'Hma1.2p1_0218F.1_g092560' => 'hma', 'Hma1.2p1_0822F.1_g224270' => 'hma', 'Hma1.2p1_1341F.1_g276870' => 'hma', 'Hma1.2p1_1572F.1_g291390' => 'hma', 'Hma1.2p1_1572F.1_g291400' => 'hma', 'Hma1.2p1_1572F.1_g291410' => 'hma', 'Hma1.2p1_2201F.1_g317032' => 'hma', 'Hma1.2p1_2201F.1_g317034' => 'hma', 'Hma1.2p1_2201F.1_g317036' => 'hma', 'HPP92_000974' => 'vpl', 'HPP92_001006' => 'vpl', 'HPP92_004062' => 'vpl', 'HPP92_006122' => 'vpl', 'HPP92_006671' => 'vpl', 'HPP92_015632' => 'vpl', 'HPP92_018619' => 'vpl', 'HPP92_019315' => 'vpl', 'HPP92_021161' => 'vpl', 'Hund02848' => 'sun', 'Hund09506' => 'sun', 'Hund09507' => 'sun', 'Hund09508' => 'sun', 'Hund12103' => 'sun', 'Hund18827' => 'sun', 'Hund20981' => 'sun', 'Lalb_Chr01g0017021' => 'lal', 'Lalb_Chr05g0227921' => 'lal', 'Lalb_Chr09g0320021' => 'lal', 'Lalb_Chr09g0335101' => 'lal', 'Lalb_Chr10g0097701' => 'lal', 'Lalb_Chr10g0102191' => 'lal', 'Lalb_Chr16g0376501' => 'lal', 'Lalb_Chr17g0340121' => 'lal', 'Lalb_Chr18g0060591' => 'lal', 'Lalb_Chr20g0123091' => 'lal', 'Lalb_Chr25g0286711' => 'lal', 'Lj1A49T58' => 'lonja', 'Lj1A49T59' => 'lonja', 'Lj1g0009633' => 'lja', 'Lj1P274T22' => 'lonja', 'Lj3A732G71' => 'lonja', 'Lj3A732G72' => 'lonja', 'Lj3P732T41' => 'lonja', 'Lj4g0015159' => 'lja', 'Lj5g0010248' => 'lja', 'Lj5g0016314' => 'lja', 'Lj5g0025398' => 'lja', 'Lj5P241T33' => 'lonja', 'Lj6A602T56' => 'lonja', 'Lj6A605G76' => 'lonja', 'Lj6A605T81' => 'lonja', 'Lj6A643T68' => 'lonja', 'Lj6C602T7' => 'lonja', 'Lj6C602T8' => 'lonja', 'Lj6C605T5' => 'lonja', 'Lj6C606T2' => 'lonja', 'Lj6g0016344' => 'lja', 'Lj6g0021468' => 'lja', 'Lj9A320T31' => 'lonja', 'LjContig00222g0014538' => 'lja', 'Lju1163C0T14' => 'lonja', 'Lsat_1_v5_gn_1_71780' => 'lsa', 'Lsat_1_v5_gn_1_71801' => 'lsa', 'Lsat_1_v5_gn_1_73221' => 'lsa', 'Lsat_1_v5_gn_2_44840' => 'lsa', 'Lsat_1_v5_gn_2_44900' => 'lsa', 'Lsat_1_v5_gn_4_3060' => 'lsa', 'Lsat_1_v5_gn_5_184461' => 'lsa', 'Lsat_1_v5_gn_5_184481' => 'lsa', 'Lsat_1_v5_gn_6_102141' => 'lsa', 'Lsat_1_v5_gn_7_81381' => 'lsa', 'Lsat_1_v5_gn_8_56821' => 'lsa', 'Lsat_1_v5_gn_8_56861' => 'lsa', 'Lsat_1_v5_gn_8_56900' => 'lsa', 'Lsat_1_v5_gn_9_26661' => 'lsa', 'Lsat_1_v5_gn_9_6220' => 'lsa', 'Manes.01G205700' => 'mes', 'Manes.02G155201' => 'mes', 'Manes.03G176400' => 'mes', 'Manes.03G176600' => 'mes', 'Manes.05G079400' => 'mes', 'Manes.05G079500' => 'mes', 'Manes.06G010100' => 'mes', 'Manes.11G111900' => 'mes', 'Manes.14G166800' => 'mes', 'Manes.15G030500' => 'mes', 'Manes.18G070100' => 'mes', 'Mapoly0001s0495' => 'mpo', 'Mapoly0030s0151' => 'mpo', 'Mapoly0033s0040' => 'mpo', 'MBI02_g30886_MAGBIO' => 'mbi', 'MBI04_g15075_MAGBIO' => 'mbi', 'MBI04_g47855_MAGBIO' => 'mbi', 'MBI05_g00786_MAGBIO' => 'mbi', 'MBI05_g00787_MAGBIO' => 'mbi', 'MBI05_g20779_MAGBIO' => 'mbi', 'MBI11_g32994_MAGBIO' => 'mbi', 'MBI13_g09971_MAGBIO' => 'mbi', 'MBI15_g31031_MAGBIO' => 'mbi', 'MBI15_g31033_MAGBIO' => 'mbi', 'MBI15_g31034_MAGBIO' => 'mbi', 'MBI19_g08299_MAGBIO' => 'mbi', 'MBI19_g08301_MAGBIO' => 'mbi', 'MD03G1018400' => 'mdo', 'MD03G1261700' => 'mdo', 'MD07G1177100' => 'mdo', 'MD08G1015200' => 'mdo', 'MD08G1015300' => 'mdo', 'MD08G1021700' => 'mdo', 'MD08G1221100' => 'mdo', 'MD09G1273500' => 'mdo', 'MD10G1180600' => 'mdo', 'MD11G1179700' => 'mdo', 'MD11G1282000' => 'mdo', 'MD11G1282100' => 'mdo', 'MD11G1282300' => 'mdo', 'MD11G1282400' => 'mdo', 'MD13G1196200' => 'mdo', 'MD15G1363600' => 'mdo', 'MD15G1411800' => 'mdo', 'MD16G1196700' => 'mdo', 'Medtr1g071730' => 'mtr', 'Medtr1g097720' => 'mtr', 'Medtr1g103450' => 'mtr', 'Medtr1g103470' => 'mtr', 'Medtr1g103490' => 'mtr', 'Medtr2g008560' => 'mtr', 'Medtr2g008580' => 'mtr', 'Medtr3g079210' => 'mtr', 'Medtr5g006950' => 'mtr', 'Medtr5g070360' => 'mtr', 'Medtr7g095230' => 'mtr', 'MELO3C006519.2' => 'cme', 'MELO3C012661.2' => 'cme', 'MELO3C014762.2' => 'cme', 'MELO3C015618.2' => 'cme', 'MELO3C018657.2' => 'cme', 'MELO3C022792.2' => 'cme', 'MELO3C031073.2' => 'cme', 'Migut.B00627' => 'egut', 'Migut.D00322' => 'egut', 'Migut.D00323' => 'egut', 'Migut.D00712' => 'egut', 'Migut.G00355' => 'egut', 'Migut.G00356' => 'egut', 'Migut.N01059' => 'egut', 'Migut.N02414' => 'egut', 'MSTRG.12555' => 'ama', 'MSTRG.16571' => 'ama', 'MSTRG.17657' => 'ama', 'MSTRG.18250' => 'ama', 'MSTRG.18251' => 'ama', 'MSTRG.18481' => 'ama', 'MSTRG.21316' => 'ama', 'MSTRG.21864' => 'ama', 'MSTRG.24733' => 'ama', 'MSTRG.27789' => 'ama', 'MSTRG.5262' => 'ama', 'MSTRG.9970' => 'ama', 'Nitab4.5_0000078g0080' => 'nta', 'Nitab4.5_0000252g0030' => 'nta', 'Nitab4.5_0000271g0180' => 'nta', 'Nitab4.5_0000321g0210' => 'nta', 'Nitab4.5_0000469g0160' => 'nta', 'Nitab4.5_0001157g0040' => 'nta', 'Nitab4.5_0001157g0050' => 'nta', 'Nitab4.5_0001237g0040' => 'nta', 'Nitab4.5_0001254g0030' => 'nta', 'Nitab4.5_0002109g0020' => 'nta', 'Nitab4.5_0002184g0120' => 'nta', 'Nitab4.5_0002567g0050' => 'nta', 'Nitab4.5_0002865g0080' => 'nta', 'Nitab4.5_0003434g0070' => 'nta', 'Nitab4.5_0005172g0020' => 'nta', 'Nitab4.5_0006783g0040' => 'nta', 'Nitab4.5_0006971g0020' => 'nta', 'Nitab4.5_0007068g0070' => 'nta', 'Nitab4.5_0007637g0010' => 'nta', 'Nitab4.5_0008064g0030' => 'nta', 'Nitab4.5_0009952g0020' => 'nta', 'Nitab4.5_0012606g0030' => 'nta', 'Nn1g02368' => 'nnu', 'Nn1g02369' => 'nnu', 'Nn1g02370' => 'nnu', 'Nn1g02371' => 'nnu', 'Nn1g03587' => 'nnu', 'Nn1g05279' => 'nnu', 'Nn5g29038' => 'nnu', 'Nn6g34112' => 'nnu', 'Nn6g34113' => 'nnu', 'Nn6g34114' => 'nnu', 'Nn6g34115' => 'nnu', 'Nn6g34116' => 'nnu', 'Nn6g34117' => 'nnu', 'Nn7g37277' => 'nnu', 'Oeu000237.1' => 'oeu', 'Oeu005858.1' => 'oeu', 'Oeu006746.1' => 'oeu', 'Oeu007949.1' => 'oeu', 'Oeu018975.2' => 'oeu', 'Oeu019210.1' => 'oeu', 'Oeu019211.1' => 'oeu', 'Oeu023613.1' => 'oeu', 'Oeu023614.1' => 'oeu', 'Oeu023615.1' => 'oeu', 'Oeu024554.1' => 'oeu', 'Oeu025743.1' => 'oeu', 'Oeu025744.1' => 'oeu', 'Oeu032071.1' => 'oeu', 'Oeu042806.1' => 'oeu', 'Oeu042807.1' => 'oeu', 'Oeu048803.2' => 'oeu', 'Oeu052359.2' => 'oeu', 'Oeu057391.1' => 'oeu', 'Oeu058968.1' => 'oeu', 'Oeu061476.1' => 'oeu', 'Os01g0814100' => 'osa', 'Os02g0286350' => 'osa', 'Os03g0192600' => 'osa', 'Os03g0323900' => 'osa', 'Os03g0385100' => 'osa', 'Os03g0385400' => 'osa', 'Os03g0793800' => 'osa', 'Os03g0794000' => 'osa', 'Os04g0462200' => 'osa', 'Os05g0489200' => 'osa', 'Os07g0174400' => 'osa', 'Os07g0174900' => 'osa', 'Os07g0175000' => 'osa', 'Os07g0175600' => 'osa', 'Os07g0489000' => 'osa', 'Os07g0625800' => 'osa', 'Peaxi162Scf00001g10028' => 'pax', 'Peaxi162Scf00003g03626' => 'pax', 'Peaxi162Scf00092g00324' => 'pax', 'Peaxi162Scf00131g00119' => 'pax', 'Peaxi162Scf00131g00121' => 'pax', 'Peaxi162Scf00152g01116' => 'pax', 'Peaxi162Scf00402g00511' => 'pax', 'Peaxi162Scf00526g00719' => 'pax', 'Peaxi162Scf00783g00014' => 'pax', 'Peaxi162Scf00783g00133' => 'pax', 'Peaxi162Scf00978g00116' => 'pax', 'Peaxi162Scf01158g00312' => 'pax', 'Peaxi162Scf01158g00313' => 'pax', 'Peaxi162Scf01158g00315' => 'pax', 'PGR004G1450' => 'pgr', 'PGR004G1647' => 'pgr', 'PGR004G2825' => 'pgr', 'PGR004G2844' => 'pgr', 'PGR004G2862' => 'pgr', 'PGR042G2985' => 'pgr', 'PGR044G0458' => 'pgr', 'PGR044G0698' => 'pgr', 'PGR044G1435' => 'pgr', 'PGR044G1959' => 'pgr', 'PGR044G2182' => 'pgr', 'PGR102G1038' => 'pgr', 'PGR119G0014' => 'pgr', 'PGR119G1076' => 'pgr', 'PGR142G0887' => 'pgr', 'PGSC0003DMG400012567' => 'stu', 'PGSC0003DMG400013434' => 'stu', 'PGSC0003DMG400019323' => 'stu', 'PGSC0003DMG400019324' => 'stu', 'PGSC0003DMG400019325' => 'stu', 'PGSC0003DMG400020131' => 'stu', 'PGSC0003DMG400027400' => 'stu', 'PGSC0003DMG400032249' => 'stu', 'PGSC0003DMG400032250' => 'stu', 'PGSC0003DMG401016309' => 'stu', 'PGSC0003DMG402016309' => 'stu', 'PGSC0003DMG402020132' => 'stu', 'Phvul.001G153500' => 'pvu', 'Phvul.002G042350' => 'pvu', 'Phvul.002G042400' => 'pvu', 'Phvul.002G207400' => 'pvu', 'Phvul.006G207500' => 'pvu', 'Phvul.007G058500' => 'pvu', 'Phvul.007G173500' => 'pvu', 'Phvul.L002737' => 'pvu', 'Potri.001G210100' => 'ptr', 'Potri.002G050300' => 'ptr', 'Potri.002G050400' => 'ptr', 'Potri.002G050500' => 'ptr', 'Potri.002G092800' => 'ptr', 'Potri.003G020200' => 'ptr', 'Potri.004G196000' => 'ptr', 'Potri.005G169000' => 'ptr', 'Potri.005G211800' => 'ptr', 'Potri.005G211900' => 'ptr', 'Potri.008G155100' => 'ptr', 'Potri.009G158100' => 'ptr', 'Potri.010G085300' => 'ptr', 'Potri.010G085400' => 'ptr', 'Pp3c10_4720' => 'ppa', 'Pp3c11_11470' => 'ppa', 'Pp3c11_8360' => 'ppa', 'Pp3c14_3790' => 'ppa', 'Pp3c14_3810' => 'ppa', 'Pp3c1_11030' => 'ppa', 'Pp3c21_12160' => 'ppa', 'Pp3c6_760' => 'ppa', 'Pp3c7_20230' => 'ppa', 'Prupe.1G016900' => 'ppe', 'Prupe.1G512100' => 'ppe', 'Prupe.1G558100' => 'ppe', 'Prupe.6G152000' => 'ppe', 'Prupe.8G237900' => 'ppe', 'Prupe.8G238000' => 'ppe', 'Psat1g217760' => 'psa', 'Psat2g058560' => 'psa', 'Psat2g189920' => 'psa', 'Psat3g063000' => 'psa', 'Psat5g112720' => 'psa', 'Psat6g059760' => 'psa', 'PSO133G0081' => 'pso', 'PSO210G4677' => 'pso', 'PSO210G7015' => 'pso', 'PSO210G7788' => 'pso', 'PSO339G5551' => 'pso', 'PSO384G4201' => 'pso', 'PSO541G5398' => 'pso', 'PSO761G0315' => 'pso', 'PSO832G3499' => 'pso', 'QL01p020250' => 'qlo', 'QL06p001741' => 'qlo', 'QL06p001747' => 'qlo', 'QL06p001777' => 'qlo', 'QL11p019810' => 'qlo', 'QL12p020989' => 'qlo', 'QL12p020991' => 'qlo', 'QL12p034642' => 'qlo', 'QL12p035988' => 'qlo', 'RcHm_v2.0_Chr5g0049721' => 'rch', 'RcHm_v2.0_Chr6g0290491' => 'rch', 'RcHm_v2.0_Chr6g0290511' => 'rch', 'RcHm_v2.0_Chr7g0226231' => 'rch', 'RcHm_v2.0_Chr7g0239921' => 'rch', 'Rhsim01G0273100' => 'rsi', 'Rhsim01G0273200' => 'rsi', 'Rhsim02G0026700' => 'rsi', 'Rhsim04G0200200' => 'rsi', 'Rhsim04G0200800' => 'rsi', 'Rhsim06G0085300' => 'rsi', 'Rhsim10G0056700' => 'rsi', 'Rhsim11G0135800' => 'rsi', 'Rhsim13G0026800' => 'rsi', 'Rhsim13G0193800' => 'rsi', 'Rhsim13G0200700' => 'rsi', 'Sabra01G0162300' => 'sbr', 'Sabra02G0041100' => 'sbr', 'Sabra02G0041200' => 'sbr', 'Sabra03G0011600' => 'sbr', 'Sabra05G0126800' => 'sbr', 'Sabra05G0161800' => 'sbr', 'Sabra05G0161900' => 'sbr', 'Sabra05G0162000' => 'sbr', 'Sabra08G0118200' => 'sbr', 'Sabra09G0123700' => 'sbr', 'Sabra10G0058100' => 'sbr', 'SalBow2G0212' => 'sbo', 'SalBow3G1550' => 'sbo', 'SalBow4G3097' => 'sbo', 'SalBow4G3230' => 'sbo', 'SalBow6G0549' => 'sbo', 'SalBow6G1789' => 'sbo', 'Sc05g0001430' => 'sci', 'Sc05g0008070' => 'sci', 'Sc05g0009990' => 'sci', 'Sc13g0004530' => 'sci', 'Sc13g0006080' => 'sci', 'Sc14g0002690' => 'sci', 'Sc17g0001290' => 'sci', 'Sc17g0006610' => 'sci', 'Sc18g0003770' => 'sci', 'Sc21g0006520' => 'sci', 'Sc24g0003310' => 'sci', 'Sed0010342' => 'sed', 'Sed0011893' => 'sed', 'Sed0019775' => 'sed', 'Sed0020787' => 'sed', 'Sed0021663' => 'sed', 'Sed0026354' => 'sed', 'Sed0026438' => 'sed', 'SEGI_00778' => 'sgi', 'SEGI_03831' => 'sgi', 'SEGI_09194' => 'sgi', 'SEGI_11962' => 'sgi', 'SEGI_13229' => 'sgi', 'SEGI_13776' => 'sgi', 'SEGI_15331' => 'sgi', 'SEGI_15622' => 'sgi', 'SEGI_15946' => 'sgi', 'SEGI_16230' => 'sgi', 'SEGI_16459' => 'sgi', 'SEGI_16683' => 'sgi', 'SEGI_17517' => 'sgi', 'SEGI_17723' => 'sgi', 'SEGI_17872' => 'sgi', 'SEGI_19623' => 'sgi', 'SEGI_20212' => 'sgi', 'SEGI_22045' => 'sgi', 'SEGI_22696' => 'sgi', 'SEGI_22879' => 'sgi', 'SEGI_25272' => 'sgi', 'SEGI_26594' => 'sgi', 'SEGI_27620' => 'sgi', 'SEGI_30746' => 'sgi', 'SEGI_32233' => 'sgi', 'SEGI_32497' => 'sgi', 'SEGI_33284' => 'sgi', 'SEGI_34446' => 'sgi', 'SEGI_34484' => 'sgi', 'SEGI_34685' => 'sgi', 'SEGI_34925' => 'sgi', 'SEGI_36919' => 'sgi', 'SEGI_37033' => 'sgi', 'SEGI_37068' => 'sgi', 'SEGI_37893' => 'sgi', 'SEGI_38085' => 'sgi', 'SEGI_40082' => 'sgi', 'SEGI_40524' => 'sgi', 'SEGI_40665' => 'sgi', 'SEGI_40981' => 'sgi', 'SGA_v2.0_scaffold145G36043' => 'sas', 'SGA_v2.0_scaffold145G36048' => 'sas', 'SGA_v2.0_scaffold151G36717' => 'sas', 'SGA_v2.0_scaffold191G40496' => 'sas', 'SGA_v2.0_scaffold1G00504' => 'sas', 'SGA_v2.0_scaffold29G12127' => 'sas', 'SGA_v2.0_scaffold45G17307' => 'sas', 'SGA_v2.0_scaffold79G25525' => 'sas', 'SGA_v2.0_scaffold81G26032' => 'sas', 'SGA_v2.0_scaffold83G26283' => 'sas', 'SGA_v2.0_scaffold8G04510' => 'sas', 'SMO118G0559' => 'smo', 'SMO146G0132' => 'smo', 'SMO358G0579' => 'smo', 'SMO364G0065' => 'smo', 'SMO367G0536' => 'smo', 'Solyc01g105010.3' => 'sly', 'Solyc03g005200.3' => 'sly', 'Solyc06g054060.1' => 'sly', 'Solyc06g054070.3' => 'sly', 'Solyc06g073660.3' => 'sly', 'Solyc06g084190.3' => 'sly', 'Solyc09g065410.4' => 'sly', 'Solyc09g065420.3' => 'sly', 'Solyc09g065430.4' => 'sly', 'Solyc09g082280.3' => 'sly', 'Solyc11g072030.3' => 'sly', 'Sopen01g047530' => 'spe', 'Sopen03g001220' => 'spe', 'Sopen06g019220' => 'spe', 'Sopen06g019230' => 'spe', 'Sopen06g030070' => 'spe', 'Sopen06g035570' => 'spe', 'Sopen09g027180' => 'spe', 'Sopen09g027200' => 'spe', 'Sopen09g027210' => 'spe', 'Sopen09g031150' => 'spe', 'Sopen09g031160' => 'spe', 'Sopen11g029680' => 'spe', 'Sp1g02110' => 'spa', 'Sp1g30630' => 'spa', 'Sp2g27150' => 'spa', 'Sp3g20370' => 'spa', 'Sp4g09870' => 'spa', 'Sp4g30080' => 'spa', 'Sp5g17510' => 'spa', 'Sp6g09220' => 'spa', 'Sp6g33960' => 'spa', 'Sp7g12950' => 'spa', 'TAR260G0005' => 'tar', 'TAR365G0559' => 'tar', 'TAR365G0676' => 'tar', 'TAR365G0864' => 'tar', 'TAR374G0276' => 'tar', 'TAR376G0535' => 'tar', 'TAR381G0274' => 'tar', 'TAR628G0745' => 'tar', 'TAR628G1546' => 'tar', 'TAR633G0260' => 'tar', 'TAR633G0452' => 'tar', 'TAR633G0728' => 'tar', 'TAR633G0877' => 'tar', 'TAR633G2725' => 'tar', 'TAR636G1943' => 'tar', 'TAR636G1990' => 'tar', 'TAR636G2677' => 'tar', 'TAR636G3306' => 'tar', 'THA.LOC104800029' => 'tha', 'THA.LOC104803040' => 'tha', 'THA.LOC104804409' => 'tha', 'THA.LOC104806798' => 'tha', 'THA.LOC104808556' => 'tha', 'THA.LOC104811287' => 'tha', 'THA.LOC104817558' => 'tha', 'THA.LOC104818431' => 'tha', 'THA.LOC104819337' => 'tha', 'THA.LOC104819501' => 'tha', 'THA.LOC104826478' => 'tha', 'Thecc.01G274900' => 'tca', 'Thecc.01G275000' => 'tca', 'Thecc.01G275100' => 'tca', 'Thecc.02G142100' => 'tca', 'Thecc.04G234700' => 'tca', 'Thecc.04G234800' => 'tca', 'Thecc.08G111400' => 'tca', 'Thecc.09G263000' => 'tca', 'Thhalv10001654m.g' => 'esa', 'Thhalv10002151m.g' => 'esa', 'Thhalv10002172m.g' => 'esa', 'Thhalv10002676m.g' => 'esa', 'Thhalv10002896m.g' => 'esa', 'Thhalv10003117m.g' => 'esa', 'Thhalv10004887m.g' => 'esa', 'Thhalv10004996m.g' => 'esa', 'Thhalv10009479m.g' => 'esa', 'Thhalv10014820m.g' => 'esa', 'Thhalv10021660m.g' => 'esa', 'Thhalv10022877m.g' => 'esa', 'Thhalv10026452m.g' => 'esa', 'Thhalv10028961m.g' => 'esa', 'TPR.G13623' => 'tpr', 'TPR.G13625' => 'tpr', 'TPR.G22779' => 'tpr', 'TPR.G24284' => 'tpr', 'TPR.G27144' => 'tpr', 'TPR.G32859' => 'tpr', 'TPR.G38049' => 'tpr', 'TPR.G5508' => 'tpr', 'TPR.G5732' => 'tpr', 'TWI12G1141' => 'twi', 'TWI18G0704' => 'twi', 'TWI23G1326' => 'twi', 'TWI31G0305' => 'twi', 'TWI53G0238' => 'twi', 'TWI53G0660' => 'twi', 'TWI56G1142' => 'twi', 'TWI59G0880' => 'twi', 'TWI73G0521' => 'twi', 'TWI73G1010' => 'twi', 'TWI75G0026' => 'twi', 'TWI75G1268' => 'twi', 'TWI75G1863' => 'twi', 'TWI79G1721' => 'twi', 'unitig_22.g5266' => 'ugi', 'unitig_26.g9328' => 'ugi', 'unitig_26.g9872' => 'ugi', 'unitig_46.g18001' => 'ugi', 'unitig_52.g16870' => 'ugi', 'unitig_578.g16207' => 'ugi', 'unitig_62.g23873' => 'ugi', 'unitig_749.g14020' => 'ugi', 'unitig_8.g3724' => 'ugi', 'unitig_899.g14835' => 'ugi', 'vmacro01816' => 'vma', 'vmacro02593' => 'vma', 'vmacro04114' => 'vma', 'vmacro14909' => 'vma', 'vmacro15354' => 'vma', 'vmacro19921' => 'vma', 'VMungo0251G1568' => 'vmu', 'VMungo0540G0785' => 'vmu', 'VMungo0540G2188' => 'vmu', 'VMungo0720G0085' => 'vmu', 'VMungo0720G1839' => 'vmu', 'VMungo0720G2867' => 'vmu', 'VMungo1383G0717' => 'vmu', 'Zm00001eb015430' => 'zma', 'Zm00001eb018690' => 'zma', 'Zm00001eb029940' => 'zma', 'Zm00001eb053780' => 'zma', 'Zm00001eb060470' => 'zma', 'Zm00001eb060490' => 'zma', 'Zm00001eb080620' => 'zma', 'Zm00001eb109750' => 'zma', 'Zm00001eb117000' => 'zma', 'Zm00001eb213110' => 'zma', 'Zm00001eb327930' => 'zma', 'Zm00001eb334250' => 'zma', 'Zm00001eb369130' => 'zma', 'Zm00001eb401230' => 'zma' ) $gf_id = 'HOM05D000489' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000489' ) $data_identifier = 'HOM05D000489' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 34, 'aar' => (int) 11, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 13, 'aox' => (int) 6, 'arhy' => (int) 15, 'ath' => (int) 13, 'atr' => (int) 3, 'acertr' => (int) 9, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 11, 'cru' => (int) 13, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 8, 'cla' => (int) 6, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 12, 'dca' => (int) 10, 'din' => (int) 13, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 5, 'egr' => (int) 10, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 34, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 14, 'cav' => (int) 6, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 11, 'lonja' => (int) 17, 'lja' => (int) 8, 'lsa' => (int) 15, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 13, 'mdo' => (int) 18, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 22, 'nnu' => (int) 14, 'oeu' => (int) 21, 'osa' => (int) 16, 'pax' => (int) 14, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppa' => (int) 9, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 9, 'qlo' => (int) 9, 'rch' => (int) 5, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 6, 'sci' => (int) 11, 'sed' => (int) 7, 'sgi' => (int) 40, 'sas' => (int) 11, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 12, 'spa' => (int) 10, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 8, 'esa' => (int) 14, 'tpr' => (int) 9, 'twi' => (int) 14, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 7, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb401230' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1